[openstreetmap/openstreetmap-website] vagrant up failing due to permission issue and more (#1888)

[Michael Hwang]

I cloned latest from master and ran `vagrant up`.  Running into the following issue:

```
...
    default: Successfully installed bundler-1.16.2
    default: Parsing documentation for bundler-1.16.2
    default: Installing ri documentation for bundler-1.16.2
    default: Done installing documentation for bundler after 4 seconds
    default: 1 gem installed
    default: /srv/openstreetmap-website /home/vagrant
    default: There was an error while trying to write to
    default: `/srv/openstreetmap-website/.bundle/config`. It is likely that you need to grant
    default: write permissions for that path.
The SSH command responded with a non-zero exit status. Vagrant
assumes that this means the command failed. The output for this command
should be in the log above. Please read the output to determine what
went wrong.
```

I think the problematic line in the provision.sh script is:

```
# do bundle install as a convenience
sudo -u ubuntu -H bundle install --retry=10 --jobs=2
```

I `vagrant ssh` into the VM and ran:

```
vagrant at ubuntu-xenial:/srv$ sudo chmod -R 777 openstreetmap-website
```

I got further but not much.  Now I have the following error:

```
vagrant at ubuntu-xenial:/srv/openstreetmap-website$ sudo -u ubuntu -H bundle install --retry=10 --jobs=2
Fetching gem metadata from https://rubygems.org/...........
Fetching rake 12.3.1
Installing rake 12.3.1
Errno::EPERM: Operation not permitted @ chown_internal - /tmp/bundler20180530-22084-xy0qt9rake-12.3.1/bin
An error occurred while installing rake (12.3.1), and Bundler cannot continue.
Make sure that `gem install rake -v '12.3.1' --source 'https://rubygems.org/'` succeeds before bundling.

In Gemfile:
  annotate was resolved to 2.7.3, which depends on
    rake
```

Help.  Thank you.

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